BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019F07SP1|AL427508
(949 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1182 1835 0.0
>3x_Contig1182
Length = 5590
Score = 1835 bits (923), Expect = 0.0
Identities = 944/951 (99%), Gaps = 2/951 (0%)
Strand = Plus / Plus
Query: 1 gatctggca-cgttccgaatgcttgtcttagccgatgaaacatatgagcmattttttgct 59
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1913 gatctggcaacgttccgaatgcttgtcttagccgatgaaacatatgagcaattttttgct 1972
Query: 60 aacaccctaaggaactctattcacgtagatgagcaggtgaacgcgctggaaagtcgctcg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 aacaccctaaggaactctattcacgtagatgagcaggtgaacgcgctggaaagtcgctcg 2032
Query: 120 aaggcattgaggaacgtatttgacggattaatcgctgatggtagaagagttgccaatcaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 aaggcattgaggaacgtatttgacggattaatcgctgatggtagaagagttgccaatcaa 2092
Query: 180 gtacggcgtagagtggactctgttgccactcagcagtcggaatcgccaagtcaagataaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 gtacggcgtagagtggactctgttgccactcagcagtcggaatcgccaagtcaagataaa 2152
Query: 240 caaattgacctagacgactttagcactgaccatggcgatgagagcatggaattattacac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 caaattgacctagacgactttagcactgaccatggcgatgagagcatggaattattacac 2212
Query: 300 tccgattatagagatttaatggatatggatgacgacgaaatgcactcggatcataaaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2213 tccgattatagagatttaatggatatggatgacgacgaaatgcactcggatcataaaaaa 2272
Query: 360 ctaaattcatttgatctagaccaatctactcacccagacaaccatcaggggaaaaaagat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2273 ctaaattcatttgatctagaccaatctactcacccagacaaccatcaggggaaaaaagat 2332
Query: 420 ctgatcgaatttgagacataagcgctgttaatccggctcttcgtatatagttctatatat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2333 ctgatcgaatttgagacataagcgctgttaatccggctcttcgtatatagttctatatat 2392
Query: 480 tatgtctathatgtattttggcaatcggagctcattacatattgccataactcaagaaaa 539
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2393 tatgtctataatgtattttggcaatcggagctcattacatattgccataactcaagaaaa 2452
Query: 540 attcaatatttgaacttctttgcaaattatattcattcattagagaaacagaggttttga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2453 attcaatatttgaacttctttgcaaattatattcattcattagagaaacagaggttttga 2512
Query: 600 aagcatattctctacttcaaaggtccaatcgacaccaggagttggacttcaaattaagaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2513 aagcatattctctacttcaaaggtccaatcgacaccaggagttggacttcaaattaagaa 2572
Query: 660 cttattctactgctatagggttgttttctgcttattataatctgacttctatcaagaatg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2573 cttattctactgctatagggttgttttctgcttattataatctgacttctatcaagaatg 2632
Query: 720 agtggtattatgaacaagtttgctcggaattgtggcaaacagttctttctcagcaatgca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2633 agtggtattatgaacaagtttgctcggaattgtggcaaacagttctttctcagcaatgca 2692
Query: 780 attcatctgcaagctcctaagatagcagctccgctttcgctgctgacacctttaaaatcg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2693 attcatctgcaagctcctaagatagcagctccgctttcgctgctgacacctttaaaatcg 2752
Query: 840 tcattatttatgctcggaaagggaa-cagttattttwatgcccttttcaagccacgctcc 898
||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||
Sbjct: 2753 tcattatttatgctcggaaagggaaccagtaattttaatgcccttttcaagccacgctcc 2812
Query: 899 cgattctttactaccacttctaatgcaaagattaatcttagggrtatgttc 949
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2813 cgattctttactaccacttctaatgcaaagattaatcttagggatatgttc 2863
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6126
Number of Sequences: 1807
Number of extensions: 6126
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)